Documentation

The User’s Guide including a Quick start section can be downloaded here
The online manual of TrakEM is located here

Release history

1.3 (2022-02-15)

configurable scalebar (Shortcut: b)
function to propagate segment status to connected treeline in subsequent layers (shortcut: Shift + k)
function to propagate diameters and status to connected treelines in all subsequent layers (Shift + p / Shift + k)
improved generation of binary masks
recovered fully functional operator interface to extend rhizoTrak’s image analysis capabilities

1.2 (2020-05-15)

minor internal changes to preserve compatibility with MiToBo library in version 2.0

1.1 (2020-03-27)

change diameter in all nodes downstream and connected treelines in other layers
added parent id for csv in detailed mode
calibration information may be added manually on export
user configurable keyboard shortcuts
write annotations as a binary image
added multi drag and drop (image loader)
rename menu entries for rhizoTrak in Fiji (now start with rhizoTrak)

1.0 (2019-02-12)

Initial release of rhizoTrak 1.0